hubUtils - Core 'hubverse' Utilities
Core set of low-level utilities common across the 'hubverse'. Used to interact with 'hubverse' schema, Hub configuration files and model outputs and designed to be primarily used internally by other 'hubverse' packages. See Reich et al. (2022) <doi:10.2105/AJPH.2022.306831> for an overview of Collaborative Hubs.
Last updated
hubverse
7.68 score 6 stars 8 dependents 80 scripts 640 downloads
hubData - Tools for accessing and working with hubverse data
A set of utility functions for accessing and working with forecast and target data from Infectious Disease Modeling Hubs.
Last updated
hubverse
6.68 score 7 stars 3 dependents 136 scripts
hubEnsembles - Ensemble Methods for Combining Hub Model Outputs
Functions for combining model outputs (e.g. predictions or estimates) from multiple models into an aggregated ensemble model output.
Last updated
hubverse
5.94 score 8 stars 1 dependents 90 scripts 532 downloads
hubValidations - Testing framework for hubverse hub validations
This package aims at providing a simple interface to run validations on data and metadata submitted to a hubverse modeling hub. Validation tests can be run at different levels (single file, single folder, whole repository) and locally as well as part of a continuous integration workflow.
Last updated
hubverse
5.66 score 4 stars 1 dependents 58 scripts
hubEvals - Tools for Scoring and Evaluating Hubverse Model Outputs
Provides tools for scoring and evaluating 'hubverse' model outputs against observed data, wrapping scoring workflows from the 'scoringutils' package and bridging hubverse model output formats to 'scoringutils' forecast classes.
Last updated
hubverse
5.51 score 5 stars 2 dependents 17 scripts
hubExamples - Example Hub Data
This package provides example data for forecasting and scenario modeling hubs in the hubverse format.
Last updated
5.00 score 1 stars 1 dependents 16 scripts
hubAdmin - Utilities for Administering Hubverse Hubs
A set of utility functions for administering 'hubverse' Hubs.
Last updated
hubverse
4.36 score 1 stars 2 dependents 27 scripts
hubDevs - Utilities for Creating and Standardising Hubverse Packages
Provides utilities for creating and maintaining Hubverse R packages with consistent structure, documentation, and CI/CD workflows. Includes functions for setting up pkgdown sites, GitHub Actions, README templates, and code formatting standards.
Last updated
hubversequarto
4.20 score 3 scripts
hubVis - Plotting methods for hub models output
Plotting methods for hub models output.
Last updated
hubverse
3.87 score 3 stars 1 dependents 33 scripts
hubCI - Toolbox for hubverse Continuous Integration
Functions for setting up hubverse Continuous Integration workflows.
Last updated
hubverse
2.88 score 1 dependents 5 scripts
hubEvals - Tools for Scoring and Evaluating Hubverse Model Outputs
Provides tools for scoring and evaluating 'hubverse' model outputs against observed data, wrapping scoring workflows from the 'scoringutils' package and bridging hubverse model output formats to 'scoringutils' forecast classes.
Last updated
2.71 score 2 dependents 17 scripts
