Package: hubData 1.2.2
Anna Krystalli
hubData: Tools for accessing and working with hubverse data
A set of utility functions for accessing and working with forecast and target data from Infectious Disease Modeling Hubs.
Authors:
hubData_1.2.2.tar.gz
hubData_1.2.2.zip(r-4.5)hubData_1.2.2.zip(r-4.4)hubData_1.2.2.zip(r-4.3)
hubData_1.2.2.tgz(r-4.4-any)hubData_1.2.2.tgz(r-4.3-any)
hubData_1.2.2.tar.gz(r-4.5-noble)hubData_1.2.2.tar.gz(r-4.4-noble)
hubData_1.2.2.tgz(r-4.4-emscripten)hubData_1.2.2.tgz(r-4.3-emscripten)
hubData.pdf |hubData.html✨
hubData/json (API)
NEWS
| # Install 'hubData' in R: |
| install.packages('hubData', repos = c('https://hubverse-org.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/hubverse-org/hubdata/issues
Last updated 23 days agofrom:c9d55de50e (on 1.2.2). Checks:OK: 3 NOTE: 4. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Aug 26 2024 |
| R-4.5-win | NOTE | Aug 26 2024 |
| R-4.5-linux | NOTE | Aug 26 2024 |
| R-4.4-win | NOTE | Aug 26 2024 |
| R-4.4-mac | NOTE | Aug 26 2024 |
| R-4.3-win | OK | Aug 26 2024 |
| R-4.3-mac | OK | Aug 26 2024 |
Exports:%>%as_model_out_tblcoerce_to_charactercoerce_to_hub_schemacollect_hubcollect_zoltarconnect_hubconnect_model_outputcreate_hub_schemacreate_model_out_submit_tmplexpand_model_out_val_gridgs_bucketload_model_metadatamodel_id_mergemodel_id_splits3_bucketvalidate_model_out_tbl
Dependencies:arrowaskpassassertthatbackportsbase64urlbitbit64cachemcheckmateclicliprcpp11crayoncurldata.tabledplyrfansifastmapfsgenericsghgitcredsgluehmshttrhttr2hubUtilsinijsonlitelifecyclelubridatemagrittrmemoisemimeMMWRweekopensslpillarpkgconfigprettyunitsprogresspurrrR6rappdirsreadrrlangstringistringrsystibbletidyselecttimechangetzdbutf8vctrsvroomwithryamlzoltr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Convert model output to a 'model_out_tbl' class object | as_model_out_tbl |
| Coerce data.frame/tibble column data types to hub schema data types or character. | coerce_to_character coerce_to_hub_schema |
| Collect Hub model output data | collect_hub |
| Load forecasts from zoltardata.com in hubverse format | collect_zoltar |
| Connect to model output data. | connect_hub connect_model_output |
| Create a Hub arrow schema | create_hub_schema |
| Create a model output submission file template | create_model_out_submit_tmpl |
| Create expanded grid of valid task ID and output type value combinations | expand_model_out_val_grid |
| Connect to a Google Cloud Storage (GCS) bucket | gs_bucket |
| Compile hub model metadata | load_model_metadata |
| Merge model output tbl 'model_id' column | model_id_merge |
| Split model output tbl 'model_id' column | model_id_split |
| Print a <hub_connection> or <mod_out_connection> S3 class object | print.hub_connection print.mod_out_connection |
| Connect to an AWS S3 bucket | s3_bucket |
| Validate a 'model_out_tbl' object | validate_model_out_tbl |
