Package: hubEnsembles 0.1.9

Li Shandross

hubEnsembles: Ensemble Methods for Combining Hub Model Outputs

Functions for combining model outputs (e.g. predictions or estimates) from multiple models into an aggregated ensemble model output.

Authors:Evan L Ray [aut], Li Shandross [aut, cre], Emily Howerton [aut], Anna Krystalli [ctb], Zhian N. Kamvar [ctb], Nicholas G. Reich [ctb], Consortium of Infectious Disease Modeling Hubs [cph]

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hubEnsembles.pdf |hubEnsembles.html✨
hubEnsembles/json (API)
NEWS

# Install 'hubEnsembles' in R:

install.packages('hubEnsembles', repos = c('https://hubverse-org.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/hubverse-org/hubensembles/issues

Datasets:

component_outputs - Example model output data for 'linear_pool()'
fweights - Example weights data for 'simple_ensemble()'
model_outputs - Example model output data for 'simple_ensemble()'
weights - Example weights data for 'linear_pool()'

On CRAN:

hubverse

6.39 score 6 stars 1 packages 30 scripts 236 downloads 2 exports 41 dependencies

Last updated 2 months agofrom:9ba5eab322 (on v0.1.9). Checks:OK: 7. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 02 2024
R-4.5-win	OK	Nov 02 2024
R-4.5-linux	OK	Nov 02 2024
R-4.4-win	OK	Nov 02 2024
R-4.4-mac	OK	Nov 02 2024
R-4.3-win	OK	Nov 02 2024
R-4.3-mac	OK	Nov 02 2024

Exports:linear_pool simple_ensemble

Dependencies:askpass backports cachem checkmate cli cpp11 curl distfromq dplyr fansi fastmap fs generics gh gitcreds glue httr2 hubUtils ini jsonlite lifecycle magrittr matrixStats memoise openssl pillar pkgconfig purrr R6 rappdirs rlang stringi stringr sys tibble tidyr tidyselect utf8 vctrs withr zeallot

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Example model output data for 'linear_pool()'	component_outputs
Example weights data for 'simple_ensemble()'	fweights
Compute ensemble model outputs as a linear pool, otherwise known as a distributional mixture, of component model outputs for each combination of model task, output type, and output type id. Supported output types include 'mean', 'quantile', 'cdf', and 'pmf'.	linear_pool
Example model output data for 'simple_ensemble()'	model_outputs
Compute ensemble model outputs by summarizing component model outputs for each combination of model task, output type, and output type id. Supported output types include 'mean', 'median', 'quantile', 'cdf', and 'pmf'.	simple_ensemble
Example weights data for 'linear_pool()'	weights