{
  "_id": "6a1f2950b401979e73423f17",
  "Package": "hubValidations",
  "Title": "Testing framework for hubverse hub validations",
  "Version": "2.1.0",
  "Authors@R": "c(\nperson(\ngiven = \"Anna\",\nfamily = \"Krystalli\",\nemail = \"annakrystalli@googlemail.com\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-2378-4915\")),\nperson(\ngiven = \"Evan\",\nfamily = \"Ray\",\nemail = \"elray@umass.edu\",\nrole = c(\"aut\")),\nperson(\ngiven = \"Hugo\",\nfamily = \"Gruson\",\nrole = c(\"aut\"),\nemail = \"hugo.gruson+R@normalesup.org\",\ncomment = c(ORCID = \"0000-0002-4094-1476\")),\nperson(\"Zhian N.\", \"Kamvar\", , \"zkamvar@gmail.com\", role = c(\"ctb\"),\ncomment = c(ORCID = \"0000-0003-1458-7108\")),\nperson(\nfamily = \"Consortium of Infectious Disease Modeling Hubs\",\nrole = c(\"cph\"))\n)",
  "Description": "This package aims at providing a simple interface to run\nvalidations on data and metadata submitted to a hubverse\nmodeling hub. Validation tests can be run at different levels\n(single file, single folder, whole repository) and locally as\nwell as part of a continuous integration workflow.",
  "License": "MIT + file LICENSE",
  "Remotes": [
    "hubverse-org/hubUtils",
    "hubverse-org/hubData",
    "hubverse-org/hubAdmin"
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  "Config/testthat/edition": "3",
  "Config/Needs/website": "pkgdown, hubverse-org/hubStyle",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "URL": "https://github.com/hubverse-org/hubValidations,\nhttps://hubverse-org.github.io/hubValidations/",
  "BugReports": "https://github.com/hubverse-org/hubValidations/issues",
  "Config/pak/sysreqs": "cmake git make libicu-dev libuv1-dev libxml2-dev\nlibssl-dev libnode-dev libx11-dev",
  "Repository": "https://hubverse-org.r-universe.dev",
  "Date/Publication": "2026-04-15 13:31:38 UTC",
  "RemoteUrl": "https://github.com/hubverse-org/hubValidations",
  "RemoteRef": "v2.1.0",
  "RemoteSha": "fd6729fb86b4bc956c45c224c4c91799383c65e5",
  "NeedsCompilation": "no",
  "Packaged": {
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    "User": "root"
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  "Author": "Anna Krystalli [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-2378-4915>),\nEvan Ray [aut],\nHugo Gruson [aut] (ORCID: <https://orcid.org/0000-0002-4094-1476>),\nZhian N. Kamvar [ctb] (ORCID: <https://orcid.org/0000-0003-1458-7108>),\nConsortium of Infectious Disease Modeling Hubs [cph]",
  "Maintainer": "Anna Krystalli <annakrystalli@googlemail.com>",
  "MD5sum": "57a7a45f73ecff9a23bd7962948422c7",
  "_user": "hubverse-org",
  "_type": "src",
  "_file": "hubValidations_2.1.0.tar.gz",
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  "_filesize": 819165,
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  "_created": "2026-05-15T14:15:36.000Z",
  "_published": "2026-06-02T19:04:48.713Z",
  "_distro": "noble",
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    "as_hub_validations_collection",
    "as_target_validations",
    "as_target_validations_collection",
    "capture_check_cnd",
    "capture_check_info",
    "capture_exec_error",
    "capture_exec_warning",
    "capture_validation_warning",
    "check_config_hub_valid",
    "check_file_exists",
    "check_file_format",
    "check_file_location",
    "check_file_n",
    "check_file_name",
    "check_file_read",
    "check_for_errors",
    "check_metadata_file_exists",
    "check_metadata_file_ext",
    "check_metadata_file_location",
    "check_metadata_file_name",
    "check_metadata_matches_schema",
    "check_metadata_schema_exists",
    "check_submission_metadata_file_exists",
    "check_submission_time",
    "check_target_dataset_exists",
    "check_target_dataset_file_ext_unique",
    "check_target_dataset_rows_unique",
    "check_target_dataset_unique",
    "check_target_file_ext_valid",
    "check_target_file_name",
    "check_target_file_read",
    "check_target_tbl_colnames",
    "check_target_tbl_coltypes",
    "check_target_tbl_oracle_value",
    "check_target_tbl_output_type_ids",
    "check_target_tbl_rows_unique",
    "check_target_tbl_ts_targets",
    "check_target_tbl_values",
    "check_tbl_col_types",
    "check_tbl_colnames",
    "check_tbl_derived_task_id_vals",
    "check_tbl_match_round_id",
    "check_tbl_rows_unique",
    "check_tbl_spl_compound_taskid_set",
    "check_tbl_spl_compound_tid",
    "check_tbl_spl_mt_unique",
    "check_tbl_spl_n",
    "check_tbl_spl_non_compound_tid",
    "check_tbl_unique_round_id",
    "check_tbl_value_col",
    "check_tbl_value_col_ascending",
    "check_tbl_value_col_sum1",
    "check_tbl_values",
    "check_tbl_values_required",
    "check_valid_round_id",
    "check_valid_round_id_col",
    "coerce_to_hub_schema",
    "combine",
    "create_custom_check",
    "create_hub_schema",
    "expand_model_out_grid",
    "extract_hive_partitions",
    "get_config_derived_task_ids",
    "get_hub_derived_task_ids",
    "get_target_task_id",
    "get_tbl_compound_taskid_set",
    "is_any_error",
    "is_error",
    "is_exec_error",
    "is_exec_warn",
    "is_failure",
    "is_hive_partitioned_path",
    "is_info",
    "is_success",
    "match_tbl_to_model_task",
    "new_hub_validations",
    "new_hub_validations_collection",
    "new_target_validations",
    "new_target_validations_collection",
    "not_pass",
    "opt_check_metadata_team_max_model_n",
    "opt_check_tbl_col_timediff",
    "opt_check_tbl_counts_lt_popn",
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    "parse_file_name",
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    "read_config_file",
    "read_model_out_file",
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    "submission_tmpl",
    "try_check",
    "validate_model_data",
    "validate_model_file",
    "validate_model_metadata",
    "validate_pr",
    "validate_submission",
    "validate_submission_time",
    "validate_target_data",
    "validate_target_dataset",
    "validate_target_file",
    "validate_target_pr",
    "validate_target_submission"
  ],
  "_help": [
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      "title": "Capture a condition of the result of validation check.",
      "topics": [
        "capture_check_cnd"
      ]
    },
    {
      "page": "capture_check_info",
      "title": "Capture a simple info message condition",
      "topics": [
        "capture_check_info"
      ]
    },
    {
      "page": "capture_exec_error",
      "title": "Capture an execution error condition",
      "topics": [
        "capture_exec_error"
      ]
    },
    {
      "page": "capture_exec_warning",
      "title": "Capture an execution warning condition",
      "topics": [
        "capture_exec_warning"
      ]
    },
    {
      "page": "capture_validation_warning",
      "title": "Capture a validation warning condition",
      "topics": [
        "capture_validation_warning"
      ]
    },
    {
      "page": "check_config_hub_valid",
      "title": "Check hub correctly configured",
      "topics": [
        "check_config_hub_valid"
      ]
    },
    {
      "page": "check_file_exists",
      "title": "Check file exists at the file path specified",
      "topics": [
        "check_file_exists"
      ]
    },
    {
      "page": "check_file_format",
      "title": "Check file format is accepted by hub.",
      "topics": [
        "check_file_format"
      ]
    },
    {
      "page": "check_file_location",
      "title": "Check file is being submitted to the correct folder",
      "topics": [
        "check_file_location"
      ]
    },
    {
      "page": "check_file_n",
      "title": "Check number of files submitted per round does not exceed the allowed number of submissions per team.",
      "topics": [
        "check_file_n"
      ]
    },
    {
      "page": "check_file_name",
      "title": "Check a model output file name can be correctly parsed.",
      "topics": [
        "check_file_name"
      ]
    },
    {
      "page": "check_file_read",
      "title": "Check file can be read successfully",
      "topics": [
        "check_file_read"
      ]
    },
    {
      "page": "check_for_errors",
      "title": "Raise conditions stored in validation objects",
      "topics": [
        "check_for_errors"
      ]
    },
    {
      "page": "check_metadata_file_exists",
      "title": "Check whether a metadata schema file exists",
      "topics": [
        "check_metadata_file_exists"
      ]
    },
    {
      "page": "check_metadata_file_ext",
      "title": "Check file is being submitted to the correct folder",
      "topics": [
        "check_metadata_file_ext"
      ]
    },
    {
      "page": "check_metadata_file_location",
      "title": "Check that the metadata file is being submitted to the correct folder",
      "topics": [
        "check_metadata_file_location"
      ]
    },
    {
      "page": "check_metadata_file_name",
      "title": "Check whether the file name of a metadata file matches the model_id or combination of team_abbr and model_abbr specified within the metadata file",
      "topics": [
        "check_metadata_file_name"
      ]
    },
    {
      "page": "check_metadata_matches_schema",
      "title": "Check whether a metadata file matches the schema provided by the hub",
      "topics": [
        "check_metadata_matches_schema"
      ]
    },
    {
      "page": "check_metadata_schema_exists",
      "title": "Check whether a metadata schema file exists",
      "topics": [
        "check_metadata_schema_exists"
      ]
    },
    {
      "page": "check_submission_metadata_file_exists",
      "title": "Check whether a metadata file for the given model exists",
      "topics": [
        "check_submission_metadata_file_exists"
      ]
    },
    {
      "page": "check_submission_time",
      "title": "Checks submission is within the valid submission window for a given round.",
      "topics": [
        "check_submission_time"
      ]
    },
    {
      "page": "check_target_dataset_exists",
      "title": "Check target dataset can be detected for a given target type",
      "topics": [
        "check_target_dataset_exists"
      ]
    },
    {
      "page": "check_target_dataset_file_ext_unique",
      "title": "Check that all files of a given target type share a single unique file format",
      "topics": [
        "check_target_dataset_file_ext_unique"
      ]
    },
    {
      "page": "check_target_dataset_rows_unique",
      "title": "Check target dataset rows are all unique",
      "topics": [
        "check_target_dataset_rows_unique"
      ]
    },
    {
      "page": "check_target_dataset_unique",
      "title": "Check that a single unique target dataset exists for a given target type.",
      "topics": [
        "check_target_dataset_unique"
      ]
    },
    {
      "page": "check_target_file_ext_valid",
      "title": "Check that a target data file has a valid extension.",
      "topics": [
        "check_target_file_ext_valid"
      ]
    },
    {
      "page": "check_target_file_name",
      "title": "Check that a hive-partitioned target data file name can be correctly parsed.",
      "topics": [
        "check_target_file_name"
      ]
    },
    {
      "page": "check_target_file_read",
      "title": "Check target file can be read successfully",
      "topics": [
        "check_target_file_read"
      ]
    },
    {
      "page": "check_target_tbl_colnames",
      "title": "Check that a target data file has the correct column names according to target type",
      "topics": [
        "check_target_tbl_colnames"
      ]
    },
    {
      "page": "check_target_tbl_coltypes",
      "title": "Check that a target data file has the correct column types according to target type",
      "topics": [
        "check_target_tbl_coltypes"
      ]
    },
    {
      "page": "check_target_tbl_oracle_value",
      "title": "Check that oracle values in an oracle output target data file are valid",
      "topics": [
        "check_target_tbl_oracle_value"
      ]
    },
    {
      "page": "check_target_tbl_output_type_ids",
      "title": "Check that output type ID values in a target data file are valid and complete",
      "topics": [
        "check_target_tbl_output_type_ids"
      ]
    },
    {
      "page": "check_target_tbl_rows_unique",
      "title": "Check target data rows are all unique",
      "topics": [
        "check_target_tbl_rows_unique"
      ]
    },
    {
      "page": "check_target_tbl_ts_targets",
      "title": "Check that targets in a time-series target data file are valid",
      "topics": [
        "check_target_tbl_ts_targets"
      ]
    },
    {
      "page": "check_target_tbl_values",
      "title": "Check that task ID columns in a target data file have valid task ID values",
      "topics": [
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